643 matches
80 actions
Rat Genome Database REST
80 actions
- Count difference of active objects, by type, for specified species and date rangeGETv1.0.0
- Count difference of external database ids, for specified species and date rangeGETv1.0.0
- Count difference of gene types, for specified species and date rangeGETv1.0.0
- Count difference of objects with external database ids, by database id, for specified species, object type and date rangeGETv1.0.0
- Count difference of objects with given status, for specified species and date rangeGETv1.0.0
- Count difference of objects with reference sequence(s), by object type, for specified species and date rangeGETv1.0.0
- Count difference of objects with reference, by object type, for specified species and date rangeGETv1.0.0
- Count difference of protein interactions, for specified species and date rangeGETv1.0.0
- Count difference of retired objects, by type, for specified species and date rangeGETv1.0.0
- Count difference of strain types, for specified species and date rangeGETv1.0.0
- Count difference of strains, by qtl inheritance type, for specified species and date rangeGETv1.0.0
- Count difference of withdrawn objects, by type, for specified species and date rangeGETv1.0.0
- Count of active objects by type, for specified species and dateGETv1.0.0
- Count of external database ids, for specied species and dateGETv1.0.0
- Count of gene types, for specified species and dateGETv1.0.0
- Count of objects with external database ids, by database id, for specified species, object type and dateGETv1.0.0
- Count of objects with given status, for specified species and dateGETv1.0.0
- Count of objects with reference sequence(s), by object type, for specified species and dateGETv1.0.0
- Count of objects with reference, by object type, for specified species and dateGETv1.0.0
- Count of protein interactions, for specified species and dateGETv1.0.0
- Count of retired objects by type, for specified species and dateGETv1.0.0
- Count of strain types, for specified species and dateGETv1.0.0
- Count of strains, by qtl inheritance type, for specified species and dateGETv1.0.0
- Count of withdrawn objects by type, for specified species and dateGETv1.0.0
- Get a gene record by RGD IDGETv1.0.0
- Get a gene record by symbol and species type keyGETv1.0.0
- Get affected genomic models (rat strains with gene alleles) submitted by RGD to AGR by taxonIdGETv1.0.0
- Get basic variant records submitted by RGD to AGR by taxonIdGETv1.0.0
- Get expression annotations submitted by RGD to AGR by taxonIdGETv1.0.0
- Get gene allele records submitted by RGD to AGR by taxonIdGETv1.0.0
- Get gene records submitted by RGD to AGR by taxonIdGETv1.0.0
- Get phenotype annotations submitted by RGD to AGR by taxonIdGETv1.0.0
- getTermStatsGETv1.0.0
- Return a chart of ontology terms annotated to the genes.Genes are rgdids separated by comma.Species type is an integer value.Aspect is the Ontology groupPOSTv1.0.0
- Return a list assembly maps for a speciesGETv1.0.0
- Return a list of all genes for a species in RGDGETv1.0.0
- Return a list of all genes with position information for an assemblyGETv1.0.0
- Return a list of assembliesGETv1.0.0
- Return a list of chromosomesGETv1.0.0
- Return a list of chromosomesGETv1.0.0
- Return a list of gene allelesGETv1.0.0
- Return a list of gene orthologsGETv1.0.0
- Return a list of gene orthologsPOSTv1.0.0
- Return a list of genes annotated to an ontology termGETv1.0.0
- Return a list of genes annotated to an ontology termPOSTv1.0.0
- Return a list of genes annotated to an ontology termPOSTv1.0.0
- Return a list of genes annotated to an ontology termGETv1.0.0
- Return a list of genes annotated to the term.Genes are rgdids separated by comma.Species type is an integer value.term is the ontologyPOSTv1.0.0
- Return a list of genes by keyword and species type keyGETv1.0.0
- Return a list of genes for an affymetrix IDGETv1.0.0
- Return a list of genes for an alias and speciesGETv1.0.0
- Return a list of genes in regionGETv1.0.0
- Return a list of genes position and map keyGETv1.0.0
- Return a list of genes position and map keyGETv1.0.0
- Return a list of pathways based on category providedGETv1.0.0
- Return a list of pathways based on search termGETv1.0.0
- Return a list of quantitative phenotypes values based on a combination of Clinical Measurement, Experimental Condition, Rat Strain, and/or Measurement Method ontology terms. Results will be all records that match all terms submitted. Ontology ids should be submitted as a comma delimited list (ex. RS:0000029,CMO:0000155,CMO:0000139). Species type is an integer value (3=rat, 4=chinchilla)GETv1.0.0
- Return a list of quantitative phenotypes values based on a combination of Clinical Measurement, Experimental Condition, Rat Strain, and/or Measurement Method ontology terms. Results will be all records that match all terms submitted. Ontology ids should be submitted as a comma delimited list (ex. RS:0000029,CMO:0000155,CMO:0000139). Species type is an integer value (3=rat, 4=chinchilla). Reference RGD ID for a study works like a filter.GETv1.0.0
- Return a Map of species type keys available in RGDGETv1.0.0
- Return a QTL for provided RGD IDGETv1.0.0
- Return a standardUnit for an ontology if it existsGETv1.0.0
- Return a strain by RGD IDGETv1.0.0
- Return all active strains by positionGETv1.0.0
- Return all active strains in RGDGETv1.0.0
- Returns a list annotations for an ontology term or a term and it's childrenGETv1.0.0
- Returns a list of annotations by RGD IDGETv1.0.0
- Returns a list of annotations by RGD ID and ontology prefixGETv1.0.0
- Returns a list of annotations by RGD ID and ontology term accession IDGETv1.0.0
- Returns a list of annotations for a referenceGETv1.0.0
- Returns a list of gene types avialable in RGDGETv1.0.0
- Returns a list ontology term accession IDs annotated to an rgd objectGETv1.0.0
- Returns a list QTL for given position and assembly mapGETv1.0.0
- Returns a list QTL for given position and assembly mapGETv1.0.0
- Returns a list SSLP for given position and assembly mapGETv1.0.0
- Returns annotation count for ontology accession IDGETv1.0.0
- Returns annotation count for ontology accession ID and object typeGETv1.0.0
- Returns annotation count for ontology accession ID and speiciesGETv1.0.0
- Returns child and parent terms for Accession IDGETv1.0.0
- Returns term for Accession IDGETv1.0.0
- Returns true or false for termsGETv1.0.0
Other/Rat Genome Database REST
Returns a list annotations for an ontology term or a term and it's children
v1.0.0Input
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{
"type": "object",
"properties": {
"accId": {
"type": "string"
},
"includeChildren": {
"type": "boolean"
},
"speciesTypeKey": {
"type": "integer",
"format": "int32"
}
},
"required": [
"accId",
"includeChildren",
"speciesTypeKey"
],
"additionalProperties": false
}Output
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{
"type": "object",
"additionalProperties": true
}